CDS

Accession Number TCMCG010C33132
gbkey CDS
Protein Id XP_016545203.1
Location join(82953155..82955214,82955342..82956166,82956494..82956784,82957751..82957958)
Gene LOC107845420
GeneID 107845420
Organism Capsicum annuum

Protein

Length 1127aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA319678
db_source XM_016689717.1
Definition PREDICTED: LOW QUALITY PROTEIN: phytochrome A [Capsicum annuum]

EGGNOG-MAPPER Annotation

COG_category K
Description Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
KEGG_ko ko:K12120        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04712        [VIEW IN KEGG]
map04712        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004672        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006417        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006468        [VIEW IN EMBL-EBI]
GO:0006793        [VIEW IN EMBL-EBI]
GO:0006796        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007602        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009416        [VIEW IN EMBL-EBI]
GO:0009581        [VIEW IN EMBL-EBI]
GO:0009582        [VIEW IN EMBL-EBI]
GO:0009583        [VIEW IN EMBL-EBI]
GO:0009585        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009606        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009629        [VIEW IN EMBL-EBI]
GO:0009630        [VIEW IN EMBL-EBI]
GO:0009637        [VIEW IN EMBL-EBI]
GO:0009638        [VIEW IN EMBL-EBI]
GO:0009639        [VIEW IN EMBL-EBI]
GO:0009640        [VIEW IN EMBL-EBI]
GO:0009642        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009881        [VIEW IN EMBL-EBI]
GO:0009883        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010017        [VIEW IN EMBL-EBI]
GO:0010018        [VIEW IN EMBL-EBI]
GO:0010114        [VIEW IN EMBL-EBI]
GO:0010161        [VIEW IN EMBL-EBI]
GO:0010201        [VIEW IN EMBL-EBI]
GO:0010203        [VIEW IN EMBL-EBI]
GO:0010218        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0016301        [VIEW IN EMBL-EBI]
GO:0016310        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016772        [VIEW IN EMBL-EBI]
GO:0016773        [VIEW IN EMBL-EBI]
GO:0017148        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0031516        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032268        [VIEW IN EMBL-EBI]
GO:0032269        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0034248        [VIEW IN EMBL-EBI]
GO:0034249        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0038023        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042802        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046685        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051246        [VIEW IN EMBL-EBI]
GO:0051248        [VIEW IN EMBL-EBI]
GO:0051606        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0055122        [VIEW IN EMBL-EBI]
GO:0060089        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071214        [VIEW IN EMBL-EBI]
GO:0071478        [VIEW IN EMBL-EBI]
GO:0071482        [VIEW IN EMBL-EBI]
GO:0071489        [VIEW IN EMBL-EBI]
GO:0071490        [VIEW IN EMBL-EBI]
GO:0071491        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0104004        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCATCTTCAAGACCTAGCCAATCTTCCACCACTTCATCAAGATCAAAGCACAGTGCTAGGATCATTGCACAGACCTCTATAGATGCAAAGTTGCATGCAGACTTTGAGGAGTCAGGTGATTCCTTTGACTATTCAAGCTCAGTGAGGGTTACGAGTGTTGCTGGAGGTGAGCAAAGGCCGAAGTCAAACAAAGTGACCACCGCTTACCTTCATCAGATCCAAAAGGGAAAGTTTATCCAGCCATTTGGTTGTTTGTTAGCCTTGGATGAGAAAACATTAAAAGTCATAGCATTCAGTGAGAATGCCCCTGAAATGCTGACCATGGTTAGCCATGCTGTTCCAAGTGTTGGTGACCATCCAGTTCTTGGCATCGGGACTGATATTAGAACTATATTCACTGGTCCTAGTGGCGCAGCATTGCAGAAGGCCTTGGGGTTTGGGGAGGTTTCTCTGTTAAATCCTGTCCTTGTTCACTGCAAAACCTCTGGGAAGCCATTTTATGCAATTGTTCATAGGGTTACAGGTAGCTTAATCATTGATTTTGAGCCTGTGAAGCCCTATGAAGTTCCCATGACTGCCGCAGGGGCCCTGCAGTCATATAAACTTGCAGCCAAAGCCATTACTCGCTTGCAATCATTGCCCAGTGGCAGTATGGAAAGACTTTGTGACACCATGGTTCAGGAGGTTTTTGAACTCACAGGTTATGACAGGGTGATGGCATATAAGTTTCACGATGATGATCATGGAGAGGTGATGTCTGAGATCACAAAGCCTGGCCTCGAGCCTTACCTTGGTTTACATTATCCTGCTACAGATATTCCACAGGCTGCACGTTTTTTGTTTATGAAGAATAAGGTCCGAATGATTTGTGATTGCCGAGCAAAACATGTGAAGGTAGTCCAAGATGAGAAGCTTCCGTTTGACTTAACATTGTGTGGCTCTACTCTTAGGGCCCCTCACTACTGCCATTTACAGTACATGGAGAACATGAATTCAATTGCATCACTTGTAATGGCAGTTGTGGTCAATGATGGGGATGAAGAAGGAGAAAGCTCTGATTCTTCACAATCCCAAAAGAGAAAAAGGCTATGGGGCCTGGTTGTTTGCCACAACACCACCCCAAGGTTCGTCCCATTTCCACTGAGGTATGCATGTGAGTTTCTTGCACAAGTCTTTGCCATACACGTTAACAAGGAACTGGAATTGGAAAATCAGTTCCTTGAGAAAAATATTCTCCGTACTCAGACTCTCTTGTGTGATATGCTGATGCGAGATGCTCCCCTAGGTATCGTGTCACAGAGCCCCAACATTATGGATCTTGTCAAATGTGATGGTGCTGCTTTGCTCTATAAGAGTAAGATACATCGATTAGGAATGACCCCAAGCGAATTTCAGCTGCATGATATAGTATCATGGCTTTGTGAATATCATACAGATTCCACAGGCTTGAGTACGGATAGCTTGTATGATGCTGGTTTTCCTGGGGCTCTTGCTCTTGGTGATGCAGTCTGTGGTATGGCGGCTGTGAGAATATCTGATAAGGACTGGCTTTTCTGGTTCAGGTCACACACTGCTGCTGAAGTTAGATGGGGTGGTGCAAAGCATGAACCTGGTGAGAAGGATGATGGCAGGAAAATGCATCCTAGGTCATCATTCAAAGCATTCCTGGAAGTTGTCAAGACAAGGAGTATACCCTGGAAGGACTATGAGATGGATGCAATCCACTCTTTGCAGCTTATACTAAGAAATGCATTTAAGGATGCTGATACTGTGAATTCAAATACCAATTCCATCCATACGAAGCTTAATGATCTAAAGATTGACGGAATGCAGGAACTAGAAGCAGTGACAGCTGAAATGGTTCGTTTAATTGAAACAGCTTCAGTCCCTATCTTTGCAGTTGATGTGGATGGGCAGGTTAATGGATGGAACACAAAAGTTGCTGAATTAACTGGTCTTCCTGTCGATGAAGCAATTGGGAAACATTTGCTCACTCTCGTGGAGGATTCATCAGTTGATACCGTGAGTAAGATGTTGGAATTAGCATTGCAGGGTACTTAAATGAATTATATACTGAAAATTTAATTGAATACACCACCCTTACACGGGCCGTCAAGGGATTCTAGTTCAATCAGCTTAATCGTGAATGCATGTGCAAGCAAGGATGTTAGAGATAGTGTTGTGGGTGTATGTTTTATTGCTCAGGATATAACTGGACAAAAAAGTATTATGGACAAGTTCACCCGAATCGAAGGTGACTATAGAGCGATTATTCAAAATCCTCACCCTTTGATCCCGCCAATATTTGGCACTGATCAGTTTGGTTGGTGTTCTGAGTGGAACTCTGCAATGACAAAGTTAACTGGATGGCGGCGTGATGATGTTATAGATAAAATGCTGTTAGGGGAGGTTTTCGGGACACAGGTAGCTAGTTGCCGTCTTAAGAATCAAGAAGCTTTTGTAAATTTTGGAGTTATACTAAACAACGCTATGGCTGGTCATGAATCTGAGAAGGTTCCTTTTGGTTTCTTTGCACGTTATGGGAAATATGTGGAGTGCTTACTCTGTGTGAGCAAAAGGTTAGATAAAGAGGGTGCAGTAATGGGGCTCTTTTGTTTCCTGCAACTTGCAAGCCATGAGTTGCAACAAGCTCTTCATGTTCAACGATTATCAGAACAAACTGCGTTGAAAAGGTTGAAAGTGTTAGCTTACATAAGGAGGCAAATTAGGAATCCTCTTTCTGGGATTATATTCTCTCGGAAGATGCTAGAGGGAACTAGCTTGGGCGAAGAGCAGAAGAATATACTGCATACAAGTGCACAGTGTCAGCGTCAGCTCAACAAAATTCTGGATGATACAGATCTTGATAGCATCATAGATGGTTATTTGGATCTGGAGATGCTCGAGTTTAAGCTGCATGAAGTATTGGTAGCATCTATTAGTCAAGTCATGATGAAGAGCAATGGAAAGAACATAATGATCTTTAATGACATGGTTGAAGATCTTCTCAATGAAACTTTGTACGGAGATAGTCCAAGGCTTCAACAAGTCATAGCTAACTTTTTGTTGGTATCCGTGAACTCTACACCAAGTGGTGGCCAGCTTAGTATTTCAGGCAGGTTAACTAAAGATCGCATAGGAGAATCTGTTCAGCTTGCTCTCTTGGAATTCAGGATAAGACACACAGGGGGTGGAGTGCCAGAAGAATTGCTTAGCCAAATGTTTGGTAGTGAAGCCGACGCATCTGAAGAAGGGATCAGCTTGCTTATCAGCAGAAAACTGGTTAAGCTGATGAATGGGGAAGTTCAGTACCTAAGAGAGGCTGGGCGATCAACTTTCATTATATCCGTTGAACTCGCAGTGGCTACCAAGTCAAGCTGA
Protein:  
MSSSRPSQSSTTSSRSKHSARIIAQTSIDAKLHADFEESGDSFDYSSSVRVTSVAGGEQRPKSNKVTTAYLHQIQKGKFIQPFGCLLALDEKTLKVIAFSENAPEMLTMVSHAVPSVGDHPVLGIGTDIRTIFTGPSGAALQKALGFGEVSLLNPVLVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVMSEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVVQDEKLPFDLTLCGSTLRAPHYCHLQYMENMNSIASLVMAVVVNDGDEEGESSDSSQSQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQFLEKNILRTQTLLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKSKIHRLGMTPSEFQLHDIVSWLCEYHTDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRISDKDWLFWFRSHTAAEVRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSIPWKDYEMDAIHSLQLILRNAFKDADTVNSNTNSIHTKLNDLKIDGMQELEAVTAEMVRLIETASVPIFAVDVDGQVNGWNTKVAELTGLPVDEAIGKHLLTLVEDSSVDTVSKMLELALQGTXMNYILKIXLNTPPLHGPSRDSSSISLIVNACASKDVRDSVVGVCFIAQDITGQKSIMDKFTRIEGDYRAIIQNPHPLIPPIFGTDQFGWCSEWNSAMTKLTGWRRDDVIDKMLLGEVFGTQVASCRLKNQEAFVNFGVILNNAMAGHESEKVPFGFFARYGKYVECLLCVSKRLDKEGAVMGLFCFLQLASHELQQALHVQRLSEQTALKRLKVLAYIRRQIRNPLSGIIFSRKMLEGTSLGEEQKNILHTSAQCQRQLNKILDDTDLDSIIDGYLDLEMLEFKLHEVLVASISQVMMKSNGKNIMIFNDMVEDLLNETLYGDSPRLQQVIANFLLVSVNSTPSGGQLSISGRLTKDRIGESVQLALLEFRIRHTGGGVPEELLSQMFGSEADASEEGISLLISRKLVKLMNGEVQYLREAGRSTFIISVELAVATKSS